netket.models.RBM#

class netket.models.RBM[source]#

Bases: flax.linen.module.Module

A restricted boltzman Machine, equivalent to a 2-layer FFNN with a nonlinear activation function in between.

Attributes
alpha: Union[float, int] = 1#

feature density. Number of features equal to alpha * input.shape[-1]

precision: Any = None#

numerical precision of the computation see jax.lax.Precision for details.

use_hidden_bias: bool = True#

if True uses a bias in the dense layer (hidden layer bias).

use_visible_bias: bool = True#

if True adds a bias to the input not passed through the nonlinear layer.

variables#

Returns the variables in this module.

Return type

Mapping[str, Mapping[str, Any]]

Methods
activation()#

Logarithm of the hyperbolic cosine, implemented in a more stable way.

has_rng(name)#

Returns true if a PRNGSequence with name name exists.

Return type

bool

Parameters

name (str) –

is_initializing()#

Returns True if running under self.init(…) or nn.init(…)().

This is a helper method to handle the common case of simple initialization where we wish to have setup logic occur when only called under module.init or nn.init. For more complicated multi-phase initialization scenarios it is better to test for the mutability of particular variable collections or for the presence of particular variables that potentially need to be initialized.

Return type

bool

kernel_init(shape, dtype=<class 'jax.numpy.float64'>)#
Return type

Any

Parameters
perturb(name, value, collection='perturbations')#

Add an zero-value variable (‘perturbation’) to the intermediate value.

The gradient of value would be the same as the gradient of this perturbation variable. Therefore, if you define your loss function with both params and perturbations as standalone arguments, you can get the intermediate gradients of value by running jax.grad on the perturbation argument.

Note: this is an experimental API and may be tweaked later for better performance and usability. At its current stage, it creates extra dummy variables that occupies extra memory space. Use it only to debug gradients in training.

Example:

import jax
import jax.numpy as jnp
import flax.linen as nn

class Foo(nn.Module):
    @nn.compact
    def __call__(self, x):
        x = nn.Dense(3)(x)
        x = self.perturb('dense3', x)
        return nn.Dense(2)(x)

def loss(params, perturbations, inputs, targets):
  variables = {'params': params, 'perturbations': perturbations}
  preds = model.apply(variables, inputs)
  return jnp.square(preds - targets).mean()

x = jnp.ones((2, 9))
y = jnp.ones((2, 2))
model = Foo()
variables = model.init(jax.random.PRNGKey(0), x)
intm_grads = jax.grad(loss, argnums=1)(variables['params'], variables['perturbations'], x, y)
print(intm_grads['dense3']) # ==> [[-1.456924   -0.44332537  0.02422847]
                            #      [-1.456924   -0.44332537  0.02422847]]
Return type

TypeVar(T)

Parameters

  • name (str) –

  • value (flax.linen.module.T) –

  • collection (str) –

put_variable(col, name, value)#

Sets the value of a Variable.

Parameters

  • col (str) – the variable collection.

  • name (str) – the name of the variable.

  • value (Any) – the new value of the variable.

Returns:

tabulate(rngs, *args, depth=None, show_repeated=False, mutable=True, console_kwargs=None, **kwargs)#

Creates a summary of the Module represented as a table.

This method has the same signature and internally calls Module.init, but instead of returning the variables, it returns the string summarizing the Module in a table. tabulate uses jax.eval_shape to run the forward computation without consuming any FLOPs or allocating memory.

Example:

import jax
import jax.numpy as jnp
import flax.linen as nn

class Foo(nn.Module):
    @nn.compact
    def __call__(self, x):
        h = nn.Dense(4)(x)
        return nn.Dense(2)(h)

x = jnp.ones((16, 9))

print(Foo().tabulate(jax.random.PRNGKey(0), x))

This gives the following output:

                                Foo Summary
┏━━━━━━━━━┳━━━━━━━━┳━━━━━━━━━━━━━━━┳━━━━━━━━━━━━━━━┳━━━━━━━━━━━━━━━━━━━━━━┓
┃ path    ┃ module ┃ inputs        ┃ outputs       ┃ params               ┃
┡━━━━━━━━━╇━━━━━━━━╇━━━━━━━━━━━━━━━╇━━━━━━━━━━━━━━━╇━━━━━━━━━━━━━━━━━━━━━━┩
│         │ Foo    │ float32[16,9] │ float32[16,2] │                      │
├─────────┼────────┼───────────────┼───────────────┼──────────────────────┤
│ Dense_0 │ Dense  │ float32[16,9] │ float32[16,4] │ bias: float32[4]     │
│         │        │               │               │ kernel: float32[9,4] │
│         │        │               │               │                      │
│         │        │               │               │ 40 (160 B)           │
├─────────┼────────┼───────────────┼───────────────┼──────────────────────┤
│ Dense_1 │ Dense  │ float32[16,4] │ float32[16,2] │ bias: float32[2]     │
│         │        │               │               │ kernel: float32[4,2] │
│         │        │               │               │                      │
│         │        │               │               │ 10 (40 B)            │
├─────────┼────────┼───────────────┼───────────────┼──────────────────────┤
│         │        │               │         Total │ 50 (200 B)           │
└─────────┴────────┴───────────────┴───────────────┴──────────────────────┘

                      Total Parameters: 50 (200 B)

Note: rows order in the table does not represent execution order, instead it aligns with the order of keys in variables which are sorted alphabetically.

Parameters

  • rngs (Union[Any, Dict[str, Any]]) – The rngs for the variable collections as passed to Module.init.

  • *args – The arguments to the forward computation.

  • depth (Optional[int]) – controls how many submodule deep the summary can go. By default its None which means no limit. If a submodule is not shown because of the depth limit, its parameter count and bytes will be added to the row of its first shown ancestor such that the sum of all rows always adds up to the total number of parameters of the Module.

  • show_repeated (bool) – If True, repeated calls to the same module will be shown in the table, otherwise only the first call will be shown. Default is False.

  • mutable (Union[bool, str, Collection[str], DenyList]) – Can be bool, str, or list. Specifies which collections should be treated as mutable: bool: all/no collections are mutable. str: The name of a single mutable collection. list: A list of names of mutable collections. By default all collections except ‘intermediates’ are mutable.

  • console_kwargs (Optional[Mapping[str, Any]]) – An optional dictionary with additional keyword arguments that are passed to rich.console.Console when rendering the table. Default arguments are {‘force_terminal’: True, ‘force_jupyter’: False}.

  • **kwargs – keyword arguments to pass to the forward computation.

Return type

str

Returns

A string summarizing the Module.

visible_bias_init(shape, dtype=<class 'jax.numpy.float64'>)#
Return type

Any

Parameters